Hierarchy For All Packages

Package Hierarchies:

chemaxon.calculations, chemaxon.formats, chemaxon.marvin, chemaxon.marvin.calculations, chemaxon.marvin.modules, chemaxon.marvin.plugin, chemaxon.marvin.plugin.gui, chemaxon.marvin.sketch, chemaxon.marvin.sketch.modules, chemaxon.marvin.space, chemaxon.marvin.space.monitor, chemaxon.marvin.util, chemaxon.struc, chemaxon.struc.graphics, chemaxon.struc.sgroup

Class Hierarchy

• class java.lang.Object
  • class chemaxon.marvin.space.AtomProperty
  • class chemaxon.marvin.space.AtomProperty.MoleculeAtomProperty (implements chemaxon.marvin.modules.MoleculeIterators.AtomPropertyInterface)
  • class chemaxon.marvin.space.BoundingBox
  • class chemaxon.marvin.plugin.CalculatorPlugin
    • class chemaxon.marvin.calculations.ConformerPlugin
    • class chemaxon.marvin.calculations.ElementalAnalyserPlugin
    • class chemaxon.marvin.calculations.GeometryPlugin
    • class chemaxon.marvin.calculations.IonChargePlugin
    • class chemaxon.marvin.calculations.IsoelectricPointPlugin
    • class chemaxon.marvin.calculations.logDPlugin
    • class chemaxon.marvin.calculations.logPPlugin
    • class chemaxon.marvin.calculations.MajorMicrospeciesAccessorPlugin
      • class chemaxon.marvin.calculations.ChargePlugin
      • class chemaxon.marvin.calculations.HBDAPlugin
      • class chemaxon.marvin.calculations.HuckelAnalysisPlugin
      • class chemaxon.marvin.calculations.MajorMicrospeciesPlugin
      • class chemaxon.marvin.calculations.MSAPlugin
      • class chemaxon.marvin.calculations.PolarizabilityPlugin
      • class chemaxon.marvin.calculations.TPSAPlugin
    • class chemaxon.marvin.calculations.MolecularDynamicsPlugin
    • class chemaxon.marvin.calculations.MultiformPlugin
      • class chemaxon.marvin.calculations.ResonancePlugin
      • class chemaxon.marvin.calculations.TautomerizationPlugin
    • class chemaxon.marvin.calculations.pKaPlugin
    • class chemaxon.marvin.calculations.RefractivityPlugin
    • class chemaxon.marvin.calculations.StereoisomerPlugin
    • class chemaxon.marvin.calculations.TopologyAnalyserPlugin
  • class chemaxon.marvin.plugin.CalculatorPluginDisplay
  • class chemaxon.marvin.plugin.CalculatorPluginOutput
  • class chemaxon.struc.CEdge (implements java.io.Serializable)
    • class chemaxon.struc.MolBond (implements chemaxon.struc.StereoConstants)
      • class chemaxon.struc.QueryBond
  • class chemaxon.marvin.space.CellOrComponentId
  • class chemaxon.struc.CGraph (implements java.lang.Cloneable, java.io.Serializable)
    • class chemaxon.struc.MoleculeGraph (implements chemaxon.struc.MTransformable, chemaxon.struc.ReadableMolecule, chemaxon.struc.StereoConstants)
      • class chemaxon.struc.Molecule
        • class chemaxon.struc.RgMolecule (implements chemaxon.struc.RgMoleculeGraphIface)
        • class chemaxon.struc.RxnMolecule
      • class chemaxon.struc.SelectionMolecule
  • class chemaxon.struc.CNode (implements java.lang.Cloneable, java.io.Serializable)
    • class chemaxon.struc.MolAtom (implements chemaxon.struc.StereoConstants)
      • class chemaxon.struc.sgroup.SgroupAtom
  • class chemaxon.marvin.plugin.CommandPlugger (implements java.io.Serializable)
    • class chemaxon.marvin.sketch.MObjectPlugger
  • class java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
    • class java.awt.Container
      • class javax.swing.JComponent (implements java.io.Serializable)
        • class javax.swing.JPanel (implements javax.accessibility.Accessible)
          • class chemaxon.marvin.space.GraphicScene (implements javax.media.opengl.GLEventListener)
          • class chemaxon.marvin.plugin.gui.ParameterPanel (implements chemaxon.marvin.plugin.ParameterPanelHandler)
      • class java.awt.Panel (implements javax.accessibility.Accessible)
        • class java.applet.Applet
          • class javax.swing.JApplet (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer)
            • class JMSketch (implements java.awt.event.MouseListener, java.lang.Runnable)
            • class JMView (implements java.awt.event.FocusListener, java.lang.Runnable)
      • class java.awt.Window (implements javax.accessibility.Accessible)
        • class java.awt.Frame (implements java.awt.MenuContainer)
          • class javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • class chemaxon.marvin.plugin.gui.OptionsPane (implements java.awt.event.ActionListener, java.awt.event.WindowListener)
  • class chemaxon.marvin.space.ComponentElement
  • class chemaxon.marvin.space.monitor.Control
    • class chemaxon.marvin.space.monitor.DihedralControl
    • class chemaxon.marvin.space.monitor.GlobalLocationControl
    • class chemaxon.marvin.space.monitor.GlobalOrientationControl
    • class chemaxon.marvin.space.monitor.LocalLocationControl
    • class chemaxon.marvin.space.monitor.LocalOrientationControl
    • class chemaxon.marvin.space.monitor.ResizeControl
  • class chemaxon.struc.CTransform3D (implements java.io.Externalizable)
  • class chemaxon.struc.DPoint3 (implements java.lang.Cloneable, java.io.Externalizable)
  • class chemaxon.calculations.ElementalAnalyser
  • class chemaxon.marvin.space.GraphicCell
  • class chemaxon.marvin.space.GraphicComponent (implements chemaxon.marvin.space.UsableObject)
    • class chemaxon.marvin.space.MacroMoleculeComponent
    • class chemaxon.marvin.space.MolecularSurfaceComponent (implements chemaxon.marvin.util.CallbackIface, chemaxon.marvin.space.UsableObject)
    • class chemaxon.marvin.space.MoleculeComponent (implements chemaxon.marvin.space.MacroMoleculeComponent.MoleculeVisualizer, chemaxon.marvin.modules.MoleculeIterators.MoleculeInterface, chemaxon.marvin.space.UsableObject)
    • class chemaxon.marvin.space.monitor.Monitor
      • class chemaxon.marvin.space.monitor.Label
      • class chemaxon.marvin.space.monitor.MeasurementMonitor
        • class chemaxon.marvin.space.monitor.AngleMonitor
        • class chemaxon.marvin.space.monitor.DihedralMonitor
        • class chemaxon.marvin.space.monitor.DistanceMonitor
      • class chemaxon.marvin.space.monitor.PositionMonitor
    • class chemaxon.marvin.space.PharmacophoreArrow (implements chemaxon.marvin.space.UsableObject)
    • class chemaxon.marvin.space.PharmacophorePoint (implements chemaxon.marvin.space.UsableObject)
    • class chemaxon.marvin.space.SurfaceComponent
  • class java.io.InputStream
    • class java.io.FilterInputStream
      • class java.io.BufferedInputStream
        • class chemaxon.marvin.io.PositionedInputStream
          • class chemaxon.formats.MolInputStream
  • class chemaxon.marvin.modules.MacroMolecule
  • class chemaxon.marvin.modules.MacroMolecule.BondMaker
  • class chemaxon.marvin.modules.MacroMolecule.Component
    • class chemaxon.marvin.modules.MacroMolecule.HeteroComponent
      • class chemaxon.marvin.modules.MacroMolecule.Water
    • class chemaxon.marvin.modules.MacroMolecule.Polymer
      • class chemaxon.marvin.modules.MacroMolecule.NucleicAcid
      • class chemaxon.marvin.modules.MacroMolecule.Protein
  • class chemaxon.marvin.modules.MacroMolecule.ComponentIterator
  • class chemaxon.marvin.modules.MacroMolecule.Compound
  • class chemaxon.marvin.modules.MacroMolecule.Polymer.AtomIterator (implements chemaxon.marvin.modules.MoleculeIterators.AtomIteratorInterface)
    • class chemaxon.marvin.modules.MacroMolecule.NucleicAcid.BackboneAtomIterator
    • class chemaxon.marvin.modules.MacroMolecule.Protein.AtomIterator
      • class chemaxon.marvin.modules.MacroMolecule.Protein.CAlphaAtomIterator
  • class chemaxon.marvin.modules.MacroMolecule.Polymer.AtomProperty (implements chemaxon.marvin.modules.MoleculeIterators.AtomPropertyInterface)
    • class chemaxon.marvin.modules.MacroMolecule.NucleicAcid.AtomProperty
    • class chemaxon.marvin.modules.MacroMolecule.Protein.AtomProperty
  • class chemaxon.marvin.modules.MacroMolecule.Polymer.BondIterator (implements chemaxon.marvin.modules.MoleculeIterators.BondIteratorInterface)
    • class chemaxon.marvin.modules.MacroMolecule.Protein.BondIterator
  • class chemaxon.marvin.modules.MacroMolecule.Polymer.Model
  • class chemaxon.marvin.modules.MacroMolecule.Protein.HelixIterator
  • class chemaxon.marvin.modules.MacroMolecule.Protein.SecondaryStructure
    • class chemaxon.marvin.modules.MacroMolecule.Protein.Helix
    • class chemaxon.marvin.modules.MacroMolecule.Protein.Sheet
    • class chemaxon.marvin.modules.MacroMolecule.Protein.Turn
  • class chemaxon.marvin.modules.MacroMolecule.Protein.SheetIterator
  • class chemaxon.marvin.modules.MacroMolecule.Protein.TurnIterator
  • class chemaxon.marvin.util.MarvinModule (implements java.io.Serializable)
    • class chemaxon.marvin.modules.AutoMapper
  • class chemaxon.formats.MdlCompressor
  • class chemaxon.struc.MDocument (implements chemaxon.struc.MTransformable, java.io.Serializable)
    • class chemaxon.struc.MSelectionDocument
  • class chemaxon.formats.MFileFormatUtil
  • class chemaxon.struc.graphics.MFont (implements java.lang.Cloneable, java.io.Serializable)
  • class chemaxon.struc.MObject (implements java.lang.Cloneable, java.io.Serializable)
    • class chemaxon.struc.graphics.MChemicalStruct
    • class chemaxon.struc.MPoint
      • class chemaxon.struc.graphics.MAtomSetPoint
      • class chemaxon.struc.graphics.MMidPoint
        • class chemaxon.struc.graphics.MMidPoint.Sticky
      • class chemaxon.struc.graphics.MRectanglePoint
        • class chemaxon.struc.graphics.MRectanglePoint.Sticky
    • class chemaxon.struc.graphics.MPolyline
      • class chemaxon.struc.graphics.MEFlow
      • class chemaxon.struc.graphics.MRectangle
        • class chemaxon.struc.graphics.MTextBox
  • class chemaxon.marvin.modules.MoleculeIterators
  • class chemaxon.marvin.modules.MoleculeIterators.MoleculeAtomIterator (implements chemaxon.marvin.modules.MoleculeIterators.AtomIteratorInterface)
  • class chemaxon.marvin.modules.MoleculeIterators.MoleculeBondIterator (implements chemaxon.marvin.modules.MoleculeIterators.BondIteratorInterface)
  • class chemaxon.marvin.util.MolExportModule
    • class chemaxon.marvin.modules.MolExport (implements chemaxon.struc.StereoConstants)
  • class chemaxon.marvin.modules.MolImport (implements chemaxon.marvin.util.MolImportIface, chemaxon.struc.StereoConstants)
  • class chemaxon.struc.MProp (implements java.lang.Cloneable, java.io.Serializable)
    • class chemaxon.struc.MDocument.Prop
  • class chemaxon.struc.MPropertyContainer (implements java.lang.Cloneable, java.io.Externalizable)
  • class chemaxon.marvin.space.MSpaceEasy (implements chemaxon.marvin.util.CallbackIface)
  • class chemaxon.struc.graphics.MTextAttributes (implements java.io.Externalizable)
  • class chemaxon.struc.graphics.MTextDocument (implements java.io.Externalizable, chemaxon.struc.graphics.MTextAttributes.MFontCreator)
  • class chemaxon.struc.graphics.MTextDocument.Portion
  • class chemaxon.struc.graphics.MTextDocument.Section
  • class chemaxon.marvin.plugin.gui.ParameterTab
  • class chemaxon.marvin.modules.PDBReader
  • class chemaxon.struc.PeriodicSystem
  • class chemaxon.marvin.plugin.PluginFactory
  • class chemaxon.marvin.plugin.PluginFactory.PluginRecord (implements java.lang.Comparable)
  • class chemaxon.struc.Sgroup (implements java.io.Serializable)
    • class chemaxon.struc.sgroup.DataSgroup
    • class chemaxon.struc.sgroup.MultipleSgroup (implements chemaxon.struc.sgroup.Expandable)
    • class chemaxon.struc.sgroup.SuperatomSgroup (implements chemaxon.struc.sgroup.Expandable)
  • class chemaxon.marvin.sketch.SketchMode (implements java.lang.Cloneable, java.io.Serializable)
    • class chemaxon.marvin.sketch.AtomSM
    • class chemaxon.marvin.sketch.BondSM (implements chemaxon.struc.StereoConstants)
    • class chemaxon.marvin.sketch.MObjectSM
      • class chemaxon.marvin.sketch.modules.LineSM
        • class chemaxon.marvin.sketch.modules.ArrowSM
          • class chemaxon.marvin.sketch.modules.ArrowSM.Regular
          • class chemaxon.marvin.sketch.modules.ArrowSM.TwoHeaded
        • class chemaxon.marvin.sketch.modules.EFlowSM
          • class chemaxon.marvin.sketch.modules.EFlow1SM
        • class chemaxon.marvin.sketch.modules.PolylineSM
      • class chemaxon.marvin.sketch.modules.RectangleSM
        • class chemaxon.marvin.sketch.modules.TextBoxSM
    • class chemaxon.marvin.sketch.MoleculeSM
    • class chemaxon.marvin.sketch.RubberSM
    • class chemaxon.marvin.sketch.SelectSM
    • class chemaxon.marvin.sketch.SgroupSM
  • class chemaxon.marvin.space.SurfaceColoring
  • class java.lang.Throwable (implements java.io.Serializable)
    • class java.lang.Exception
      • class java.io.IOException
        • class chemaxon.marvin.util.MolExportException
      • class chemaxon.marvin.modules.MacroMolecule.BadMoleculeException
      • class chemaxon.marvin.plugin.PluginException
  • class chemaxon.calculations.TopologyAnalyser
  • class chemaxon.marvin.VersionInfo

Interface Hierarchy

• interface chemaxon.struc.sgroup.Expandable
• interface chemaxon.marvin.plugin.LicenseFieldHandler
• interface chemaxon.marvin.space.MacroMoleculeComponent.MoleculeVisualizer
• interface chemaxon.marvin.modules.MoleculeIterators.AtomIteratorInterface
• interface chemaxon.marvin.modules.MoleculeIterators.AtomPropertyInterface
• interface chemaxon.marvin.modules.MoleculeIterators.BondIteratorInterface
• interface chemaxon.marvin.modules.MoleculeIterators.MoleculeInterface
• interface chemaxon.marvin.util.MolImportIface
  • interface chemaxon.marvin.util.MDocumentImportIface
• interface chemaxon.struc.MTransformable
• interface chemaxon.marvin.plugin.ParameterPanelHandler
• interface chemaxon.struc.StereoConstants